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README.md

ENSLyonReview — class for the ENS de Lyon M2 Biosciences bibliographic review

Version 1.0 | License: LPPL 1.3c | Author: Adama Mbaye

A class for the "Analyse bibliographique" review of the M2 Biosciences Master at ENS de Lyon (tracks: Biosciences, Biosciences-Santé, Biosciences et modélisation des systèmes complexes), in the Current Opinion journal format. Sibling package to enslyonstage (M1/M2 internship reports).

It reproduces, in , the reference LibreOffice template review_M2.ott supplied by F. Roudier (UE coordinator): title block, two-column body, running header/footer, figure/table/box, and an annotated reference list.

See enslyonreview.pdf (the full user guide — compiled from enslyonreview.tex, French) for detailed usage.

Usage

\documentclass{enslyonreview}                % official theme (default)
\documentclass[blue]{enslyonreview}          % named colour theme
\documentclass[palatino]{enslyonreview}      % Palatino instead of newtx (Times)
\documentclass[xcharter]{enslyonreview}      % Charter instead of newtx (Times)
\documentclass[stix]{enslyonreview}          % STIX Two instead of newtx (Times)

Start from enslyonreview-gabarit.tex. See enslyonreview-exemple.tex for a fully worked example exercising every feature (figure, table, box, list, annotated references). It reproduces, in full and verbatim (text, figures, table, all 50 references), "Antiviral restriction factors in immunity and disease" by Erika Larrahondo Rodríguez (M2 Review, Dec 2024) — the finished-document example F. Roudier already circulates alongside review_M2.ott — so the class can be checked page-for-page against a real, previously produced review. Authorship stays attributed to her in the title block; she has agreed to her work being distributed as this package's worked example.

Compilation

Requires pdf + biber (citations are real biblatex \cites, not typed bracket numbers):

pdflatex enslyonreview-gabarit
biber    enslyonreview-gabarit
pdflatex enslyonreview-gabarit
pdflatex enslyonreview-gabarit

On Overleaf: set the compiler to pdfLaTeX and the bibliography tool to biber (Menu → Compiler / Bibliography).

Writing your reference list

References live in a .bib file (references.bib for the gabarit, enslyonreview-exemple.bib for the worked example — see that file's header comment for the exact field conventions: how to write author initials, and the custom pmid/pmcid fields). Cite with \cite{key} anywhere in the text — numbers are assigned automatically in first-appearance order and compress into ranges like [8-10], exactly like the source CurrentOpinion_w_DOI_PMID_PMCID.csl Zotero style. Zotero's "Export Items… → " gives you a ready-to-use .bib directly (hand-add pmid/pmcid afterwards if you want them shown — Zotero doesn't export those).

End the print call with \printbibliography[title=References] (or title=References and recommended reading to match the .ott's suggested heading instead — that's the default if you omit title=). The "of special/outstanding interest" legend is inserted automatically.

Marking a reference "of special/outstanding interest"

This is declared from the .tex file, not the .bib — a plain Zotero export doesn't carry it, and re-exporting later would silently wipe it if it had been hand-added to the .bib. Anywhere before \printbibliography (conventionally right under \addbibresource):

\refspecialinterest{someCiteKey}{Why this paper matters.}      % •  of special interest
\refoutstandinginterest{otherCiteKey}{Why this one matters more.}  % •• of outstanding interest

The bullet + italic annotation is then inserted automatically right under that reference wherever it prints, keyed by citation key — no need to touch the driver or the .bib again if you re-export from Zotero.

Refer to a figure, table or box with \cref{label} / \Cref{label} (capitalised at the start of a sentence) instead of typing "Fig. 1" or "Table 1" by hand — it stays correct if you reorder things, and it's a clickable link. Use \crefcolor{label} / \Crefcolor{label} instead for the same reference in bold, theme-coloured text (matching the citation brackets' styling).

Files

File Description
enslyonreview.cls The class
enslyonreview.dbx Biblatex data-model extension (declares the pmid/pmcid/interest/interestnote fields) — required, keep next to the .cls
enslyonreview-gabarit.tex Blank review template
references.bib Starter bibliography database for the gabarit
enslyonreview-exemple.tex Fully worked example
enslyonreview-exemple.bib The 50 references cited in the worked example
enslyonreview.tex / .pdf Full user guide (French), built from source
README.md This file
LICENSE LPPL 1.3c

Colour themes (23)

orange (default, official — reviewM2.ott's own rust/peach) · orangeens (official ENS de Lyon institutional orange, same as enslyonstage's default) · violet · blue · red · green · teal · gray · navy · indigo · purple · pink · crimson · amber · gold · lime · forest · cyan · azure · slate · brown · wine · midnight

Known limitations

  • The header/footer colour bars span the text width, not a full paper-edge bleed (avoids extra image assets — visually equivalent, not pixel-identical to review_M2.ott).
  • Clicking the in-PDF link to a Box cross-reference may not always jump to the right place in some PDF viewers (cosmetic hyperref/custom-float quirk); the printed number and text are always correct.
  • No biber/.bib file handy? A manual fallback still exists: \bibref{}{} {}{}{}{} + \bibdoi/\bibpmid/\bibpmcid inside a \begin{references}...\end{references} list, with \ofspecialinterest{}/ \ofoutstandinginterest{} for annotations. Citations then aren't clickable/auto-numbered, so \cite + biblatex is the recommended path.

License

Copyright (C) 2026 Adama Mbaye. Released under the Project Public License v1.3c or later. See LICENSE or https://www.latex-project.org/lppl/lppl-1-3c/

Download the contents of this package in one zip archive (1.5M).

ENSLyonReview – A class for M2 Biosciences bibliographic reviews at ENS de Lyon

This class reproduces the format required for the Analyse bibliographique review of the M2 Biosciences Master at ENS de Lyon (course coordinator: François Roudier): full-width title block with abstract and keywords, two-column body, running header/footer, figure/table/box floats, and a numbered bibliography with of special/outstanding interest annotations – built on biblatex+biber for real, clickable, auto-numbered citations. Sibling package to enslyonstage (M1/M2 internship reports). The worked example reproduces, with permission, Antiviral restriction factors in immunity and disease by Erika Larrahondo Rodríguez, a real, previously approved M2 review.

PackageENSLyonReview
Repository
Version1.0 2026-08-24
LicensesThe Project Public License 1.3c
Copyright2026 Adama Mbaye
MaintainerAdama Mbaye
Contained inTeX Live as enslyonreview
TopicsFrench
Std conform
Journal
Document template
Class
...
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