CTAN Comprehensive TeX Archive Network

CTAN upload notification: shade v1.8

Date: August 31, 2004 4:10:26 PM CEST
> Name of contribution: TeXshade v1.8 > Name and email: Eric Beitz <eric.beitz at uni-tuebingen.de> > Suggested location on CTAN: macros/latex/contrib/texshade/ > Summary description: Update v1.8 of the TeXshade package for setting sequence alignments > License type: gpl > > Announcement text: > ---------------------------------------------------------------------- > This is version 1.8 of the nucleotide and protein sequence alignment setting > package TeXshade. New powerful feature styles have been implemented, > which allow one to plot sequence related numeral data, such as hydropathy or > solvent accessibility etc., as bar graphs or color scales along the alignment. > ---------------------------------------------------------------------- Thanks for the upload. I installed it as suggested replacing the previous version in CTAN:macros/latex/contrib/texshade/ Reinhard Zierke for the CTAN team

texshade – Package for setting nucleotide and peptide alignments

shade is alignment shading software completely written in /; it can process multiple sequence alignments in the .MSF and the .ALN file formats. In addition to common shading algorithms, it provides special shading modes showing functional aspects, e.g. charge or hydropathy, and a wide range of commands for handling shading colours, text styles, labels, legends; it even allows the user to define completely new shading modes. shade combines highest flexibility with output quality — all in a bundle that does not demand excessive development time of the user.

Copyright1999–2024 Eric Beitz
MaintainerEric Beitz



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